biological database
C24488
concept
A biological database is an organized, searchable repository that stores, manages, and provides access to biological information such as sequences, structures, functions, and interactions of biomolecules and organisms.
All labels observed (30)
| Label | Occurrences |
|---|---|
| biological database canonical | 15 |
| protein sequence database | 3 |
| NCBI database | 2 |
| biological pathway collection | 2 |
| protein database | 2 |
| HGNC gene entry | 1 |
| NCBI database resource | 1 |
| NMR data bank | 1 |
| UniProt database component | 1 |
| automatically annotated protein sequence database | 1 |
| bioinformatics database | 1 |
| curated database resource | 1 |
| functional genomics repository | 1 |
| gene expression database | 1 |
| genetic test database | 1 |
| genetic variant database | 1 |
| genetics database | 1 |
| genomic database | 1 |
| genomics database | 1 |
| life sciences data center | 1 |
| manually curated protein sequence database | 1 |
| model organism database | 1 |
| nucleotide sequence database | 1 |
| paleogenomic dataset | 1 |
| protein domain database | 1 |
| protein information resource | 1 |
| protein sequence archive | 1 |
| section of UniProt Knowledgebase | 1 |
| sequence database | 1 |
| structural variation database | 1 |
Description generation (CDg)
The one-sentence description above was generated by prompting gpt-5.1 with the class name and this instruction.
Instruction
generate a one-sentence description for a given conceptual class. # Response Format Return only the sentence: "Description: [one-sentence description of the conceptional class]"
Input
Class: biological database
Generated description
A biological database is an organized, searchable repository that stores, manages, and provides access to biological information such as sequences, structures, functions, and interactions of biomolecules and organisms.
Instances (28)
| Instance | Via concept surface |
|---|---|
| Protein Data Bank | — |
| Neanderthal genome | paleogenomic dataset |
| FlyBase | — |
| HGNC:28350 | HGNC gene entry |
| RefSeq | — |
| dbVar | genomic database |
| BioProject database | — |
| GEO DataSets | — |
| GEO Profiles | NCBI database resource |
| PopSet database | — |
|
ClinVar
linked to:
ClinVar database
|
genetic variant database |
| PubChem BioAssay | — |
|
UniGene
linked to:
UniGene database
|
— |
| GTR Tests database | genetic test database |
| Protein database | — |
| GenBank | — |
| Conserved Domain Database | — |
| BioSample database | — |
| European Bioinformatics Institute | life sciences data center |
| BMRB | — |
| UniProtKB/Swiss-Prot | protein database |
| UniParc | protein sequence archive |
| UniRef | protein sequence database |
| Protein Information Resource | protein database |
| KEGG pathways | biological pathway collection |
| UniProtKB/TrEMBL | protein sequence database |
| Reactome pathways | biological pathway collection |
| UniProt Knowledgebase | — |