Protein Information Resource
E736818
Protein Information Resource is a bioinformatics resource center that curates, annotates, and provides access to comprehensive protein sequence and functional information for the scientific community.
All labels observed (1)
| Label | Occurrences |
|---|---|
| Protein Information Resource canonical | 5 |
How this entity was disambiguated
This entity first appeared as the object of triple T8482756 — resolving that mention is where its identity was fixed. The disambiguator weighed these candidate entities and picked the highlighted one (or “None”, minting a new entity). This is how homonymy is resolved: the same surface form can point to different entities.
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Protein Information Resource Context triple: [UniProt protein sequences, maintainedBy, Protein Information Resource]
-
A.
Protein database
The Protein database is a curated collection of protein sequences and related functional, structural, and bibliographic information maintained by the National Center for Biotechnology Information (NCBI).
-
B.
UniProt protein sequences
UniProt protein sequences are a comprehensive, curated collection of protein sequence data that serves as a primary reference resource for protein information in biological and biomedical research.
-
C.
Protein Data Bank
The Protein Data Bank is a global repository that archives and provides open access to 3D structural data of biological macromolecules such as proteins and nucleic acids.
-
D.
BioProject database
The BioProject database is an NCBI resource that organizes and links together data from large-scale biological research projects, such as genome sequencing and functional genomics studies.
-
E.
EMBL-EBI AlphaFold Protein Structure Database
The EMBL-EBI AlphaFold Protein Structure Database is a publicly accessible resource providing predicted 3D structures of proteins generated by DeepMind’s AlphaFold system.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: Protein Information Resource Target entity description: Protein Information Resource is a bioinformatics resource center that curates, annotates, and provides access to comprehensive protein sequence and functional information for the scientific community.
-
A.
Protein database
The Protein database is a curated collection of protein sequences and related functional, structural, and bibliographic information maintained by the National Center for Biotechnology Information (NCBI).
-
B.
UniProt protein sequences
UniProt protein sequences are a comprehensive, curated collection of protein sequence data that serves as a primary reference resource for protein information in biological and biomedical research.
-
C.
Protein Data Bank
The Protein Data Bank is a global repository that archives and provides open access to 3D structural data of biological macromolecules such as proteins and nucleic acids.
-
D.
BioProject database
The BioProject database is an NCBI resource that organizes and links together data from large-scale biological research projects, such as genome sequencing and functional genomics studies.
-
E.
EMBL-EBI AlphaFold Protein Structure Database
The EMBL-EBI AlphaFold Protein Structure Database is a publicly accessible resource providing predicted 3D structures of proteins generated by DeepMind’s AlphaFold system.
- F. None of above. chosen
Statements (48)
| Predicate | Object |
|---|---|
| instanceOf |
bioinformatics resource center
ⓘ
protein database ⓘ |
| accessMode |
online database
ⓘ
web-based interface ⓘ |
| accessPolicy | publicly accessible ⓘ |
| dataType |
protein classification data
ⓘ
protein family information ⓘ protein functional annotations ⓘ protein ontology terms ⓘ protein sequences ⓘ |
| field |
bioinformatics
ⓘ
computational biology ⓘ |
| focus |
protein functional information
ⓘ
protein sequence information ⓘ |
| goal |
enable access to curated protein data
ⓘ
provide comprehensive protein information ⓘ support biological research ⓘ support functional characterization of proteins ⓘ |
| hasActivity |
annotation of protein sequences
ⓘ
curation of protein data ⓘ development of bioinformatics resources ⓘ integration of protein-related information ⓘ maintenance of protein databases ⓘ |
| hasFeature |
controlled vocabularies
ⓘ
cross-references to other databases ⓘ curated protein records ⓘ downloadable datasets ⓘ searchable annotations ⓘ |
| provides |
bioinformatics tools
ⓘ
curated protein information ⓘ database search services ⓘ protein classification resources ⓘ protein functional annotation ⓘ protein ontology resources ⓘ protein sequence data ⓘ |
| supports |
comparative genomics analyses
ⓘ
functional genomics research ⓘ protein function prediction ⓘ proteome annotation ⓘ sequence similarity search ⓘ |
| targetAudience |
bioinformaticians
ⓘ
biologists ⓘ biomedical researchers ⓘ scientific community ⓘ |
| usedFor |
data mining of protein properties
ⓘ
hypothesis generation in biology ⓘ protein characterization ⓘ supporting experimental design ⓘ |
How these facts were elicited
The pipeline generated the facts above by prompting gpt-5.1 with this entity's name + description and the instruction below.
Instruction
You are a knowledge base construction expert. Given a subject entity and a description of it, return factual statements that you know for the subject as a JSON list of dictionaries(triples), where keys must be "subject", "predicate" and "object". The number of facts may be very high, between 25 to 50 or more, for very popular subjects. For less popular subjects, the number of facts can be very low, like 5 or 10. # Requirements - If you don't know the subject at all, return an empty list. - If the subject is not a named entity, return an empty list. - Include at least one triple where predicate is "instanceOf". - Do not get too wordy. - Separate several objects into multiple triples with one object.
Input
Subject: Protein Information Resource Description of subject: Protein Information Resource is a bioinformatics resource center that curates, annotates, and provides access to comprehensive protein sequence and functional information for the scientific community.
Referenced by (5)
Full triples — surface form annotated when it differs from this entity's canonical label.