PopSet database
E569123
The PopSet database is an NCBI resource that stores aligned nucleotide sequence sets from population, phylogenetic, and evolutionary studies for comparative analysis.
All labels observed (1)
| Label | Occurrences |
|---|---|
| PopSet database canonical | 1 |
How this entity was disambiguated
This entity first appeared as the object of triple T6098291 — resolving that mention is where its identity was fixed. The disambiguator weighed these candidate entities and picked the highlighted one (or “None”, minting a new entity). This is how homonymy is resolved: the same surface form can point to different entities.
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: PopSet database Context triple: [Entrez system, hasPart, PopSet database]
-
A.
OPDB
OPDB is the ICAO airport code for Dalbandin Airport, a regional airport serving the town of Dalbandin in Balochistan, Pakistan.
-
B.
Cornerstone database
Cornerstone database is a mid-1980s business database application developed by Infocom, notable for its user-friendly interface but commercial failure that contributed to the company's decline.
-
C.
DBE
DBE is the title "Dame Commander of the Order of the British Empire," a high-ranking honor awarded in the British honours system.
-
D.
DB
DB is the standard abbreviation for "Deutsche Biographie," a major German biographical reference work documenting notable figures from German history and culture.
-
E.
DB
DB is the commonly used abbreviation for Deutsche Bahn, Germany’s national railway company and one of the largest rail operators in Europe.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: PopSet database Target entity description: The PopSet database is an NCBI resource that stores aligned nucleotide sequence sets from population, phylogenetic, and evolutionary studies for comparative analysis.
-
A.
OPDB
OPDB is the ICAO airport code for Dalbandin Airport, a regional airport serving the town of Dalbandin in Balochistan, Pakistan.
-
B.
Cornerstone database
Cornerstone database is a mid-1980s business database application developed by Infocom, notable for its user-friendly interface but commercial failure that contributed to the company's decline.
-
C.
DBE
DBE is the title "Dame Commander of the Order of the British Empire," a high-ranking honor awarded in the British honours system.
-
D.
DB
DB is the standard abbreviation for "Deutsche Biographie," a major German biographical reference work documenting notable figures from German history and culture.
-
E.
DB
DB is the commonly used abbreviation for Deutsche Bahn, Germany’s national railway company and one of the largest rail operators in Europe.
- F. None of above. chosen
Statements (49)
| Predicate | Object |
|---|---|
| instanceOf |
NCBI resource
ⓘ
biological database ⓘ |
| accessibleVia | NCBI Entrez search interface ⓘ |
| accessMethod |
programmatic access via NCBI E-utilities
ⓘ
web interface ⓘ |
| availability | freely accessible ⓘ |
| contains |
sequences derived from multiple individuals
ⓘ
sequences from multiple species ⓘ sets of sequences submitted under a single study ⓘ |
| dataType |
multiple sequence alignments
ⓘ
nucleotide sequences ⓘ |
| focusesOn |
evolutionary studies
ⓘ
phylogenetic studies ⓘ population studies ⓘ |
| groupingCriterion |
common biological study
ⓘ
shared publication ⓘ shared submitter ⓘ |
| hasFeature |
cross-links to literature references
ⓘ
cross-links to original sequence records ⓘ taxonomic information for sequences ⓘ |
| hostedAt | NCBI website ⓘ |
| identifierType | PopSet ID ⓘ |
| language | English ⓘ |
| linkedTo |
GenBank
ⓘ
PubMed ⓘ Taxonomy database ⓘ |
| maintainedBy |
NCBI
ⓘ
National Center for Biotechnology Information ⓘ |
| organizesBy |
study
ⓘ
submission ⓘ |
| partOf |
NCBI Entrez system
ⓘ
linked to:
Entrez system
|
| scope |
DNA sequences
ⓘ
RNA sequences ⓘ |
| stores | aligned nucleotide sequence sets ⓘ |
| supports |
FASTA export
ⓘ
GenBank format export ⓘ analysis of haplotype diversity ⓘ analysis of phylogenetic relationships ⓘ comparative analysis of genetic variation ⓘ comparative sequence analysis ⓘ download of sequence sets ⓘ |
| useCase |
molecular evolution research
ⓘ
phylogeography ⓘ population genetics ⓘ species delimitation studies ⓘ |
| usedBy |
bioinformaticians
ⓘ
evolutionary biologists ⓘ population geneticists ⓘ systematists ⓘ |
How these facts were elicited
The pipeline generated the facts above by prompting gpt-5.1 with this entity's name + description and the instruction below.
Instruction
You are a knowledge base construction expert. Given a subject entity and a description of it, return factual statements that you know for the subject as a JSON list of dictionaries(triples), where keys must be "subject", "predicate" and "object". The number of facts may be very high, between 25 to 50 or more, for very popular subjects. For less popular subjects, the number of facts can be very low, like 5 or 10. # Requirements - If you don't know the subject at all, return an empty list. - If the subject is not a named entity, return an empty list. - Include at least one triple where predicate is "instanceOf". - Do not get too wordy. - Separate several objects into multiple triples with one object.
Input
Subject: PopSet database Description of subject: The PopSet database is an NCBI resource that stores aligned nucleotide sequence sets from population, phylogenetic, and evolutionary studies for comparative analysis.
Referenced by (1)
Full triples — surface form annotated when it differs from this entity's canonical label.