dbVar
E569114
dbVar is a public NCBI database that archives and provides access to human genomic structural variation data, such as insertions, deletions, and copy number variants.
All labels observed (1)
| Label | Occurrences |
|---|---|
| dbVar canonical | 2 |
How this entity was disambiguated
This entity first appeared as the object of triple T6098244 — resolving that mention is where its identity was fixed. The disambiguator weighed these candidate entities and picked the highlighted one (or “None”, minting a new entity). This is how homonymy is resolved: the same surface form can point to different entities.
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: dbVar Context triple: [National Center for Biotechnology Information, hasDatabase, dbVar]
-
A.
DB
DB is the standard abbreviation for "Deutsche Biographie," a major German biographical reference work documenting notable figures from German history and culture.
-
B.
DB
DB is the commonly used abbreviation for Deutsche Bahn, Germany’s national railway company and one of the largest rail operators in Europe.
-
C.
DBE
DBE is the title "Dame Commander of the Order of the British Empire," a high-ranking honor awarded in the British honours system.
-
D.
DBDT
DBDT is a renowned professional modern dance company based in Dallas, Texas, known for its diverse repertory and commitment to arts education and community outreach.
-
E.
DB1
DB1 is the stock ticker symbol for Deutsche Börse AG, a major German exchange organization that operates the Frankfurt Stock Exchange and related financial market infrastructure.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: dbVar Target entity description: dbVar is a public NCBI database that archives and provides access to human genomic structural variation data, such as insertions, deletions, and copy number variants.
-
A.
DB
DB is the standard abbreviation for "Deutsche Biographie," a major German biographical reference work documenting notable figures from German history and culture.
-
B.
DB
DB is the commonly used abbreviation for Deutsche Bahn, Germany’s national railway company and one of the largest rail operators in Europe.
-
C.
DBE
DBE is the title "Dame Commander of the Order of the British Empire," a high-ranking honor awarded in the British honours system.
-
D.
DBDT
DBDT is a renowned professional modern dance company based in Dallas, Texas, known for its diverse repertory and commitment to arts education and community outreach.
-
E.
DB1
DB1 is the stock ticker symbol for Deutsche Börse AG, a major German exchange organization that operates the Frankfurt Stock Exchange and related financial market infrastructure.
- F. None of above. chosen
Statements (48)
| Predicate | Object |
|---|---|
| instanceOf |
NCBI database
ⓘ
genomic database ⓘ structural variation database ⓘ |
| accessibleVia |
NCBI E-utilities API
ⓘ
NCBI website ⓘ web browser ⓘ |
| accessPolicy | open access without registration ⓘ |
| aimsTo |
standardize representation of structural variants
ⓘ
support research on genomic structural variation ⓘ |
| archives |
complex genomic rearrangements
ⓘ
copy number variants ⓘ copy number variation ⓘ deletions ⓘ duplications ⓘ insertions ⓘ inversions ⓘ |
| countryOfOperator |
United States
ⓘ
linked to:
United States of America
|
| dataSource |
clinical and research submissions
ⓘ
large-scale genomic projects ⓘ published studies ⓘ |
| dataType |
genomic structural variation data
ⓘ
human genomic variation data ⓘ sequence-level variation annotations ⓘ |
| focusesOn |
human genomic structural variation
ⓘ
structural variants ⓘ |
| hasIdentifierPrefix |
esv
ⓘ
nsv ⓘ ssv ⓘ |
| hasPrimaryURL | https://www.ncbi.nlm.nih.gov/dbvar ⓘ |
| hostedOn | NCBI infrastructure ⓘ |
| integratedWith |
ClinVar
ⓘ
linked to:
ClinVar database
NCBI Gene ⓘ
linked to:
NCBI Gene database
NCBI Genome Data Viewer ⓘ
linked to:
Genome Data Viewer
dbSNP ⓘ |
| license | free public access ⓘ |
| maintainedBy |
NCBI
ⓘ
National Center for Biotechnology Information ⓘ |
| operatedBy | National Center for Biotechnology Information ⓘ |
| partOf |
NCBI Entrez system
ⓘ
linked to:
Entrez system
|
| primarySpecies | Homo sapiens ⓘ |
| provides |
downloadable variant datasets
ⓘ
links to related NCBI resources ⓘ public access to structural variation data ⓘ search interface for structural variants ⓘ |
| subjectArea |
bioinformatics
ⓘ
genomics ⓘ human genetics ⓘ |
| supportsSpecies | Homo sapiens ⓘ |
How these facts were elicited
The pipeline generated the facts above by prompting gpt-5.1 with this entity's name + description and the instruction below.
Instruction
You are a knowledge base construction expert. Given a subject entity and a description of it, return factual statements that you know for the subject as a JSON list of dictionaries(triples), where keys must be "subject", "predicate" and "object". The number of facts may be very high, between 25 to 50 or more, for very popular subjects. For less popular subjects, the number of facts can be very low, like 5 or 10. # Requirements - If you don't know the subject at all, return an empty list. - If the subject is not a named entity, return an empty list. - Include at least one triple where predicate is "instanceOf". - Do not get too wordy. - Separate several objects into multiple triples with one object.
Input
Subject: dbVar Description of subject: dbVar is a public NCBI database that archives and provides access to human genomic structural variation data, such as insertions, deletions, and copy number variants.
Referenced by (2)
Full triples — surface form annotated when it differs from this entity's canonical label.
subject linked to:
ClinVar database