Triple

T23466488
Position Surface form Disambiguated ID Type / Status
Subject dbVar E569114 entity
Predicate accessibleVia P1985 FINISHED
Object NCBI website
The NCBI website is an online portal maintained by the National Center for Biotechnology Information that provides access to a wide range of biological databases, tools, and resources for genomic and biomedical research.
E135929 NE FINISHED

How this triple was built (4 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: NCBI website | Statement: [dbVar, accessibleVia, NCBI website]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07
Target entity: NCBI website
Context triple: [dbVar, accessibleVia, NCBI website]
  • A. NCBI databases
    NCBI databases are a collection of publicly accessible biological data resources, including nucleotide and protein sequences, genomes, and literature, maintained by the U.S. National Center for Biotechnology Information.
  • B. National Center for Biotechnology Information
    The National Center for Biotechnology Information (NCBI) is a U.S. government bioinformatics institution that develops and hosts major biological databases and tools for biomedical research.
  • C. NCBI Bookshelf
    NCBI Bookshelf is a free online resource from the National Center for Biotechnology Information that provides access to a wide range of biomedical books, reports, and other full-text scholarly literature.
  • D. NCBI E-utilities API
    The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
  • E. GenBank
    GenBank is a comprehensive public database of nucleotide sequences and their associated annotation, widely used as a primary resource for genetic and genomic research.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: NCBI website
Triple: [dbVar, accessibleVia, NCBI website]
Generated description
The NCBI website is an online portal maintained by the National Center for Biotechnology Information that provides access to a wide range of biological databases, tools, and resources for genomic and biomedical research.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07
Target entity: NCBI website
Target entity description: The NCBI website is an online portal maintained by the National Center for Biotechnology Information that provides access to a wide range of biological databases, tools, and resources for genomic and biomedical research.
  • A. NCBI databases
    NCBI databases are a collection of publicly accessible biological data resources, including nucleotide and protein sequences, genomes, and literature, maintained by the U.S. National Center for Biotechnology Information.
  • B. National Center for Biotechnology Information chosen
    The National Center for Biotechnology Information (NCBI) is a U.S. government bioinformatics institution that develops and hosts major biological databases and tools for biomedical research.
  • C. NCBI Bookshelf
    NCBI Bookshelf is a free online resource from the National Center for Biotechnology Information that provides access to a wide range of biomedical books, reports, and other full-text scholarly literature.
  • D. NCBI E-utilities API
    The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
  • E. GenBank
    GenBank is a comprehensive public database of nucleotide sequences and their associated annotation, widely used as a primary resource for genetic and genomic research.
  • F. None of above.

Provenance (5 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69e2458ebd808190b3298163132cfb0b completed April 17, 2026, 2:37 p.m.
NER Named-entity recognition batch_69f1a6faaf8c8190b4fd191c54e1acea completed April 29, 2026, 6:36 a.m.
NED1 Entity disambiguation (via context triple) batch_6a0c8254f3fc819098b6b59eb19e27f0 completed May 19, 2026, 3:31 p.m.
NEDg Description generation batch_6a0ca6efb0d88190bf15b18cc3f12482 completed May 19, 2026, 6:07 p.m.
NED2 Entity disambiguation (via description) batch_6a0ca819f6dc8190852bb3c06768ac5a completed May 19, 2026, 6:12 p.m.
Created at: April 17, 2026, 5:54 p.m.