Triple
T14427053
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | pMT1 |
E357722
|
entity |
| Predicate | molecularFunctionContext |
P114242
|
FINISHED |
| Object | virulence factor expression platform |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: virulence factor expression platform | Statement: [pMT1, molecularFunctionContext, virulence factor expression platform]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: molecularFunctionContext Context triple: [pMT1, molecularFunctionContext, virulence factor expression platform]
-
A.
molecularFunction
Indicates the specific biochemical activity or role that a molecule (typically a gene product or protein) performs at the molecular level.
-
B.
hasMolecularFunction
Indicates that an entity (typically a gene product or protein) performs or is associated with a specific molecular-level activity or function.
-
C.
primaryFunctionContext
Indicates the main situational or operational context in which a function, role, or process is primarily intended to be used or performed.
-
D.
subcellularLocation
Indicates the specific location or compartment within a cell where an entity (such as a molecule or structure) is situated or functions.
-
E.
conceptualFunction
Indicates a relationship where one entity serves as an abstract or conceptual function that operates on, transforms, or maps another entity within a conceptual or theoretical framework.
- F. None of above. chosen
Provenance (4 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69d8279402a88190821ffa39ae15bccf |
completed | April 9, 2026, 10:26 p.m. |
| NER | Named-entity recognition | batch_69de911398f08190be85bc0a8bef6b1b |
completed | April 14, 2026, 7:10 p.m. |
| PD | Predicate disambiguation | batch_69de5c30467881908e770e3940295641 |
completed | April 14, 2026, 3:24 p.m. |
| PDg | Predicate description generation | batch_69de5fb4de14819092acdecbd201d672 |
completed | April 14, 2026, 3:39 p.m. |
Created at: April 10, 2026, 1:18 a.m.