Paenibacillus
E940864
Paenibacillus is a genus of Gram-positive, endospore-forming bacteria commonly found in soil and known for their roles in nitrogen fixation, plant growth promotion, and biodegradation.
All labels observed (1)
| Label | Occurrences |
|---|---|
| Paenibacillus canonical | 2 |
How this entity was disambiguated
This entity first appeared as the object of triple T11466935 — resolving that mention is where its identity was fixed. The disambiguator weighed these candidate entities and picked the highlighted one (or “None”, minting a new entity). This is how homonymy is resolved: the same surface form can point to different entities.
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Paenibacillus Context triple: [Firmicutes, contains, Paenibacillus]
-
A.
Bacillus
Bacillus is a genus of rod-shaped, endospore-forming bacteria that includes both harmless environmental species and notable pathogens such as Bacillus anthracis.
-
B.
Virgibacillus
Virgibacillus is a genus of Gram-positive, spore-forming, often halophilic bacteria commonly found in saline and alkaline environments.
-
C.
Bacillaceae
Bacillaceae is a family of Gram-positive, rod-shaped, endospore-forming bacteria that includes medically and environmentally significant genera such as Bacillus.
-
D.
Bacillales
Bacillales is an order of Gram-positive, rod-shaped bacteria that includes medically and environmentally important genera such as Bacillus and Staphylococcus.
-
E.
Oceanobacillus
Oceanobacillus is a genus of Gram-positive, rod-shaped, often halophilic bacteria commonly found in marine and saline environments.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: Paenibacillus Target entity description: Paenibacillus is a genus of Gram-positive, endospore-forming bacteria commonly found in soil and known for their roles in nitrogen fixation, plant growth promotion, and biodegradation.
-
A.
Bacillus
Bacillus is a genus of rod-shaped, endospore-forming bacteria that includes both harmless environmental species and notable pathogens such as Bacillus anthracis.
-
B.
Virgibacillus
Virgibacillus is a genus of Gram-positive, spore-forming, often halophilic bacteria commonly found in saline and alkaline environments.
-
C.
Bacillaceae
Bacillaceae is a family of Gram-positive, rod-shaped, endospore-forming bacteria that includes medically and environmentally significant genera such as Bacillus.
-
D.
Bacillales
Bacillales is an order of Gram-positive, rod-shaped bacteria that includes medically and environmentally important genera such as Bacillus and Staphylococcus.
-
E.
Oceanobacillus
Oceanobacillus is a genus of Gram-positive, rod-shaped, often halophilic bacteria commonly found in marine and saline environments.
- F. None of above. chosen
Statements (48)
| Predicate | Object |
|---|---|
| instanceOf | bacterial genus ⓘ |
| biocontrolActivity | true ⓘ |
| biocontrolMechanism |
antifungal compound production
ⓘ
competition for nutrients and niches ⓘ induction of systemic resistance in plants ⓘ |
| cellMorphology | rod-shaped ⓘ |
| class |
Bacilli
ⓘ
linked to:
Bacillales
|
| ecologicalRole |
biodegradation of organic matter
ⓘ
nitrogen-fixing bacterium ⓘ plant growth-promoting rhizobacterium ⓘ |
| enzymeProduction |
amylase
ⓘ
cellulase ⓘ chitinase ⓘ protease ⓘ xylanase ⓘ |
| family | Paenibacillaceae ⓘ |
| firstDescribedBy | Ash et al. ⓘ |
| flagellaType | peritrichous flagella ⓘ |
| formsEndospores | true ⓘ |
| genomeType | circular chromosome ⓘ |
| gramStain | Gram-positive ⓘ |
| habitat |
freshwater
ⓘ
plant roots ⓘ rhizosphere ⓘ soil ⓘ |
| industrialApplication |
biocontrol agent in agriculture
ⓘ
biofertilizer ⓘ bioremediation ⓘ production of industrial enzymes ⓘ |
| kingdom | Bacteria ⓘ |
| metabolicCapability |
cellulose degradation
ⓘ
starch degradation ⓘ xylan degradation ⓘ |
| motility | motile ⓘ |
| nitrogenFixation | true ⓘ |
| order | Paenibacillales ⓘ |
| oxygenRequirement | facultatively anaerobic ⓘ |
| pathogenicity | generally non-pathogenic to humans ⓘ |
| phylum |
Bacillota
ⓘ
linked to:
Firmicutes
|
| plantGrowthPromotion | true ⓘ |
| plantGrowthPromotionMechanism |
biological nitrogen fixation
ⓘ
indole-3-acetic acid production ⓘ phosphate solubilization ⓘ siderophore production ⓘ |
| sporeResistance |
desiccation resistant
ⓘ
heat resistant ⓘ |
| taxonRank | genus ⓘ |
| yearDescribed | 1994 ⓘ |
How these facts were elicited
The pipeline generated the facts above by prompting gpt-5.1 with this entity's name + description and the instruction below.
Instruction
You are a knowledge base construction expert. Given a subject entity and a description of it, return factual statements that you know for the subject as a JSON list of dictionaries(triples), where keys must be "subject", "predicate" and "object". The number of facts may be very high, between 25 to 50 or more, for very popular subjects. For less popular subjects, the number of facts can be very low, like 5 or 10. # Requirements - If you don't know the subject at all, return an empty list. - If the subject is not a named entity, return an empty list. - Include at least one triple where predicate is "instanceOf". - Do not get too wordy. - Separate several objects into multiple triples with one object.
Input
Subject: Paenibacillus Description of subject: Paenibacillus is a genus of Gram-positive, endospore-forming bacteria commonly found in soil and known for their roles in nitrogen fixation, plant growth promotion, and biodegradation.
Referenced by (2)
Full triples — surface form annotated when it differs from this entity's canonical label.