Triple
T22693516
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | EWSR1 |
E561108
|
entity |
| Predicate | formsFusionWith |
P149326
|
FINISHED |
| Object |
FLI1
FLI1 is a transcription factor of the ETS family involved in hematopoiesis and vascular development, and is notably implicated in Ewing sarcoma through oncogenic gene fusions.
|
E1551056
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: FLI1 | Statement: [EWSR1, formsFusionWith, FLI1]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: FLI1 Context triple: [EWSR1, formsFusionWith, FLI1]
-
A.
Wnt1
Wnt1 is a highly conserved signaling protein in the Wnt family that plays a crucial role in embryonic development, cell fate determination, and oncogenesis in vertebrates.
-
B.
FOXA2 transcription factor
FOXA2 transcription factor is a forkhead box transcription factor that plays a key role in regulating genes involved in pancreatic beta-cell function, glucose metabolism, and endoderm development.
-
C.
Sox2
Sox2 is a key transcription factor that maintains stem cell pluripotency and self-renewal and is widely used in cellular reprogramming.
-
D.
CTCF
CTCF is a state prison facility in Colorado that houses incarcerated individuals under the jurisdiction of the Colorado Department of Corrections.
-
E.
RBL1
RBL1 is a tumor suppressor protein of the retinoblastoma family that regulates cell cycle progression by controlling E2F transcription factor activity.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: FLI1 Triple: [EWSR1, formsFusionWith, FLI1]
Generated description
FLI1 is a transcription factor of the ETS family involved in hematopoiesis and vascular development, and is notably implicated in Ewing sarcoma through oncogenic gene fusions.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: FLI1 Target entity description: FLI1 is a transcription factor of the ETS family involved in hematopoiesis and vascular development, and is notably implicated in Ewing sarcoma through oncogenic gene fusions.
-
A.
Wnt1
Wnt1 is a highly conserved signaling protein in the Wnt family that plays a crucial role in embryonic development, cell fate determination, and oncogenesis in vertebrates.
-
B.
FOXA2 transcription factor
FOXA2 transcription factor is a forkhead box transcription factor that plays a key role in regulating genes involved in pancreatic beta-cell function, glucose metabolism, and endoderm development.
-
C.
Sox2
Sox2 is a key transcription factor that maintains stem cell pluripotency and self-renewal and is widely used in cellular reprogramming.
-
D.
CTCF
CTCF is a state prison facility in Colorado that houses incarcerated individuals under the jurisdiction of the Colorado Department of Corrections.
-
E.
RBL2
RBL2 is a tumor suppressor protein of the retinoblastoma family that regulates cell cycle progression by controlling E2F transcription factor activity.
- F. None of above. chosen
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e2454d71b48190a1f80af9f82b6fcf |
completed | April 17, 2026, 2:35 p.m. |
| NER | Named-entity recognition | batch_69f1789c6ae481908975b7d27e7624ac |
completed | April 29, 2026, 3:18 a.m. |
| NED1 | Entity disambiguation (via context triple) | batch_6a0b7ece75648190a841256cf08a72f8 |
completed | May 18, 2026, 9:04 p.m. |
| NEDg | Description generation | batch_6a0b834f488c8190bee40bd1caea0e40 |
completed | May 18, 2026, 9:23 p.m. |
| NED2 | Entity disambiguation (via description) | batch_6a0b8717b65c819089d29c1802d1ed55 |
completed | May 18, 2026, 9:39 p.m. |
Created at: April 17, 2026, 3:13 p.m.