Triple

T22693430
Position Surface form Disambiguated ID Type / Status
Subject TAF15 E561107 entity
Predicate encodedBy P14248 FINISHED
Object TAF15 gene
The TAF15 gene encodes a multifunctional RNA-binding protein involved in transcription regulation and RNA processing, and is implicated in certain cancers through gene fusions.
 E1551047 NE FINISHED

How this triple was built (4 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: TAF15 gene | Statement: [TAF15, encodedBy, TAF15 gene]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07 
Target entity: TAF15 gene
Context triple: [TAF15, encodedBy, TAF15 gene]
  • A. CTCF
    CTCF is a state prison facility in Colorado that houses incarcerated individuals under the jurisdiction of the Colorado Department of Corrections.
  • B. FOXA2 transcription factor
    FOXA2 transcription factor is a forkhead box transcription factor that plays a key role in regulating genes involved in pancreatic beta-cell function, glucose metabolism, and endoderm development.
  • C. TARDBP
    TARDBP is a gene encoding the TDP-43 protein, a DNA/RNA-binding protein whose abnormal aggregation is a key pathological feature in amyotrophic lateral sclerosis and related neurodegenerative diseases.
  • D. GNAS
    GNAS is the abbreviation for the Georgian National Academy of Sciences, the leading scientific institution in Georgia that coordinates and promotes research across various disciplines.
  • E. MAFA transcription factor
    MAFA transcription factor is a beta cell–specific transcription factor that plays a key role in regulating insulin gene expression and pancreatic islet function.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: TAF15 gene
Triple: [TAF15, encodedBy, TAF15 gene]
Generated description
The TAF15 gene encodes a multifunctional RNA-binding protein involved in transcription regulation and RNA processing, and is implicated in certain cancers through gene fusions.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07 
Target entity: TAF15 gene
Target entity description: The TAF15 gene encodes a multifunctional RNA-binding protein involved in transcription regulation and RNA processing, and is implicated in certain cancers through gene fusions.
  • A. CTCF
    CTCF is a state prison facility in Colorado that houses incarcerated individuals under the jurisdiction of the Colorado Department of Corrections.
  • B. FOXA2 transcription factor
    FOXA2 transcription factor is a forkhead box transcription factor that plays a key role in regulating genes involved in pancreatic beta-cell function, glucose metabolism, and endoderm development.
  • C. TARDBP
    TARDBP is a gene encoding the TDP-43 protein, a DNA/RNA-binding protein whose abnormal aggregation is a key pathological feature in amyotrophic lateral sclerosis and related neurodegenerative diseases.
  • D. GNAS
    GNAS is the abbreviation for the Georgian National Academy of Sciences, the leading scientific institution in Georgia that coordinates and promotes research across various disciplines.
  • E. MAFA transcription factor
    MAFA transcription factor is a beta cell–specific transcription factor that plays a key role in regulating insulin gene expression and pancreatic islet function.
  • F. None of above. chosen

Provenance (5 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69e2454d71b48190a1f80af9f82b6fcf completed April 17, 2026, 2:35 p.m.
NER Named-entity recognition batch_69f1789c6ae481908975b7d27e7624ac completed April 29, 2026, 3:18 a.m.
NED1 Entity disambiguation (via context triple) batch_6a0b7ece75648190a841256cf08a72f8 completed May 18, 2026, 9:04 p.m.
NEDg Description generation batch_6a0b834f488c8190bee40bd1caea0e40 completed May 18, 2026, 9:23 p.m.
NED2 Entity disambiguation (via description) batch_6a0b8717b65c819089d29c1802d1ed55 completed May 18, 2026, 9:39 p.m.
Created at: April 17, 2026, 3:13 p.m.