Triple

T22690575
Position Surface form Disambiguated ID Type / Status
Subject BTK E561038 entity
Predicate hasDomain P1248 FINISHED
Object SH3 domain
The SH3 domain is a small protein module found in many signaling and cytoskeletal proteins that typically binds proline-rich sequences to mediate protein–protein interactions.
E1549333 NE FINISHED

How this triple was built (4 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: SH3 domain | Statement: [BTK, hasDomain, SH3 domain]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07
Target entity: SH3 domain
Context triple: [BTK, hasDomain, SH3 domain]
  • A. Notch intracellular domain
    The Notch intracellular domain is the cleaved, cytoplasmic fragment of the Notch receptor that translocates to the nucleus to regulate gene transcription in the Notch signaling pathway.
  • B. Ezrin
    Ezrin is a Canadian music producer and songwriter best known for his work on landmark rock albums by artists such as Pink Floyd, Alice Cooper, and Kiss.
  • C. PLCγ2
    PLCγ2 is a phospholipase C isoform that functions as a key signaling enzyme in immune cells, mediating receptor-induced calcium mobilization and downstream activation pathways.
  • D. LIN-12/Notch repeats
    LIN-12/Notch repeats are a series of conserved extracellular protein motifs characteristic of Notch family receptors that mediate protein–protein interactions crucial for Notch signaling.
  • E. Cdh1
    Cdh1 is a regulatory protein that activates the anaphase-promoting complex/cyclosome (APC/C) to control mitotic exit and G1 phase progression in the cell cycle.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: SH3 domain
Triple: [BTK, hasDomain, SH3 domain]
Generated description
The SH3 domain is a small protein module found in many signaling and cytoskeletal proteins that typically binds proline-rich sequences to mediate protein–protein interactions.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07
Target entity: SH3 domain
Target entity description: The SH3 domain is a small protein module found in many signaling and cytoskeletal proteins that typically binds proline-rich sequences to mediate protein–protein interactions.
  • A. Notch intracellular domain
    The Notch intracellular domain is the cleaved, cytoplasmic fragment of the Notch receptor that translocates to the nucleus to regulate gene transcription in the Notch signaling pathway.
  • B. Ezrin
    Ezrin is a Canadian music producer and songwriter best known for his work on landmark rock albums by artists such as Pink Floyd, Alice Cooper, and Kiss.
  • C. PLCγ2
    PLCγ2 is a phospholipase C isoform that functions as a key signaling enzyme in immune cells, mediating receptor-induced calcium mobilization and downstream activation pathways.
  • D. LIN-12/Notch repeats
    LIN-12/Notch repeats are a series of conserved extracellular protein motifs characteristic of Notch family receptors that mediate protein–protein interactions crucial for Notch signaling.
  • E. Cdh1
    Cdh1 is a regulatory protein that activates the anaphase-promoting complex/cyclosome (APC/C) to control mitotic exit and G1 phase progression in the cell cycle.
  • F. None of above. chosen

Provenance (5 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69e2454d71b48190a1f80af9f82b6fcf completed April 17, 2026, 2:35 p.m.
NER Named-entity recognition batch_69f1789a1fd08190bce5fa0babe695d3 completed April 29, 2026, 3:18 a.m.
NED1 Entity disambiguation (via context triple) batch_6a0b73fa5a648190b90ba303d1fe2397 completed May 18, 2026, 8:18 p.m.
NEDg Description generation batch_6a0b7755eb048190ba1657a9a09bc24b completed May 18, 2026, 8:32 p.m.
NED2 Entity disambiguation (via description) batch_6a0b780c0a4c8190b51b50c1e0e1a114 completed May 18, 2026, 8:35 p.m.
Created at: April 17, 2026, 3:13 p.m.