Triple
T20373614
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Dexter Holland |
E497633
|
entity |
| Predicate | thesisTitle |
P1860
|
FINISHED |
| Object |
Discovery of mature microRNA sequences within the protein-coding regions of global HIV-1 genomes: predictions of novel mechanisms for viral infection and pathogenicity
"Discovery of mature microRNA sequences within the protein-coding regions of global HIV-1 genomes: predictions of novel mechanisms for viral infection and pathogenicity" is a doctoral dissertation that investigates how microRNA elements embedded in HIV-1 coding regions may influence the virus’s infection processes and disease-causing potential.
|
E1426089
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Discovery of mature microRNA sequences within the protein-coding regions of global HIV-1 genomes: predictions of novel mechanisms for viral infection and pathogenicity | Statement: [Dexter Holland, thesisTitle, Discovery of mature microRNA sequences within the protein-coding regions of global HIV-1 genomes: predictions of novel mechanisms for viral infection and pathogenicity]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Discovery of mature microRNA sequences within the protein-coding regions of global HIV-1 genomes: predictions of novel mechanisms for viral infection and pathogenicity Context triple: [Dexter Holland, thesisTitle, Discovery of mature microRNA sequences within the protein-coding regions of global HIV-1 genomes: predictions of novel mechanisms for viral infection and pathogenicity]
-
A.
HIV-1 integrase
HIV-1 integrase is a viral enzyme that inserts HIV-1’s genetic material into the host cell’s DNA, making it a key target for antiretroviral drugs.
-
B.
Baltimore classification of viruses
The Baltimore classification of viruses is a system that groups viruses into seven classes based on their type of nucleic acid and replication strategy, providing a framework for understanding viral genetics and life cycles.
-
C.
HIV-1 reverse transcriptase
HIV-1 reverse transcriptase is a viral enzyme that converts the HIV-1 RNA genome into DNA, making it a key target for antiretroviral drugs used in HIV treatment.
-
D.
HCV NS5B RNA-dependent RNA polymerase
HCV NS5B RNA-dependent RNA polymerase is the viral enzyme in hepatitis C virus responsible for replicating its RNA genome and a key target for direct-acting antiviral drugs.
-
E.
Molecular Biology of Bacterial Viruses
Molecular Biology of Bacterial Viruses is a classic scientific monograph that helped establish the foundations of molecular genetics through the study of bacteriophages.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Discovery of mature microRNA sequences within the protein-coding regions of global HIV-1 genomes: predictions of novel mechanisms for viral infection and pathogenicity Triple: [Dexter Holland, thesisTitle, Discovery of mature microRNA sequences within the protein-coding regions of global HIV-1 genomes: predictions of novel mechanisms for viral infection and pathogenicity]
Generated description
"Discovery of mature microRNA sequences within the protein-coding regions of global HIV-1 genomes: predictions of novel mechanisms for viral infection and pathogenicity" is a doctoral dissertation that investigates how microRNA elements embedded in HIV-1 coding regions may influence the virus’s infection processes and disease-causing potential.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: Discovery of mature microRNA sequences within the protein-coding regions of global HIV-1 genomes: predictions of novel mechanisms for viral infection and pathogenicity Target entity description: "Discovery of mature microRNA sequences within the protein-coding regions of global HIV-1 genomes: predictions of novel mechanisms for viral infection and pathogenicity" is a doctoral dissertation that investigates how microRNA elements embedded in HIV-1 coding regions may influence the virus’s infection processes and disease-causing potential.
-
A.
HIV-1 integrase
HIV-1 integrase is a viral enzyme that inserts HIV-1’s genetic material into the host cell’s DNA, making it a key target for antiretroviral drugs.
-
B.
Baltimore classification of viruses
The Baltimore classification of viruses is a system that groups viruses into seven classes based on their type of nucleic acid and replication strategy, providing a framework for understanding viral genetics and life cycles.
-
C.
HIV-1 reverse transcriptase
HIV-1 reverse transcriptase is a viral enzyme that converts the HIV-1 RNA genome into DNA, making it a key target for antiretroviral drugs used in HIV treatment.
-
D.
HCV NS5B RNA-dependent RNA polymerase
HCV NS5B RNA-dependent RNA polymerase is the viral enzyme in hepatitis C virus responsible for replicating its RNA genome and a key target for direct-acting antiviral drugs.
-
E.
Molecular Biology of Bacterial Viruses
Molecular Biology of Bacterial Viruses is a classic scientific monograph that helped establish the foundations of molecular genetics through the study of bacteriophages.
- F. None of above. chosen
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e0b4a5b7908190a972e4e7e698ae94 |
completed | April 16, 2026, 10:06 a.m. |
| NER | Named-entity recognition | batch_69e678aad7b08190a710a75d6828b21e |
completed | April 20, 2026, 7:04 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_6a0870918c908190b87b6a491bc33f4e |
completed | May 16, 2026, 1:26 p.m. |
| NEDg | Description generation | batch_6a08716520948190b7b4c8818cafa520 |
completed | May 16, 2026, 1:30 p.m. |
| NED2 | Entity disambiguation (via description) | batch_6a0871b5776481908db103e118d6e489 |
completed | May 16, 2026, 1:31 p.m. |
Created at: April 16, 2026, 11:27 a.m.