Triple
T19151316
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | University of Pittsburgh School of Medicine |
E468813
|
entity |
| Predicate | hasAcademicDepartment |
P589
|
FINISHED |
| Object |
Department of Computational and Systems Biology
The Department of Computational and Systems Biology is an academic unit specializing in the study and application of computational methods and systems-level approaches to understand complex biological processes.
|
E1361655
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Department of Computational and Systems Biology | Statement: [University of Pittsburgh School of Medicine, hasAcademicDepartment, Department of Computational and Systems Biology]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Department of Computational and Systems Biology Context triple: [University of Pittsburgh School of Medicine, hasAcademicDepartment, Department of Computational and Systems Biology]
-
A.
Department of Computational Biology and Medical Sciences
The Department of Computational Biology and Medical Sciences is an academic unit specializing in the integration of computational methods with biological and medical research to advance understanding of complex life and health systems.
-
B.
Department of Computational Molecular Biology
The Department of Computational Molecular Biology is a research unit specializing in algorithmic and statistical methods for analyzing molecular and genomic data within the Max Planck Institute for Molecular Genetics.
-
C.
Department 6: Computational Biology
Department 6: Computational Biology is a research division of the Max Planck Institute for Informatics focused on developing computational methods to study biological systems and data.
-
D.
Computational Biology Department, Carnegie Mellon University
The Computational Biology Department at Carnegie Mellon University is an academic unit specializing in research and education at the intersection of computer science, biology, and related quantitative disciplines.
-
E.
Institute of Systems Biology
The Institute of Systems Biology is a research center at Universiti Kebangsaan Malaysia focused on integrative, interdisciplinary studies of biological systems using computational and experimental approaches.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Department of Computational and Systems Biology Triple: [University of Pittsburgh School of Medicine, hasAcademicDepartment, Department of Computational and Systems Biology]
Generated description
The Department of Computational and Systems Biology is an academic unit specializing in the study and application of computational methods and systems-level approaches to understand complex biological processes.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: Department of Computational and Systems Biology Target entity description: The Department of Computational and Systems Biology is an academic unit specializing in the study and application of computational methods and systems-level approaches to understand complex biological processes.
-
A.
Department of Computational Biology and Medical Sciences
The Department of Computational Biology and Medical Sciences is an academic unit specializing in the integration of computational methods with biological and medical research to advance understanding of complex life and health systems.
-
B.
Department of Computational Molecular Biology
The Department of Computational Molecular Biology is a research unit specializing in algorithmic and statistical methods for analyzing molecular and genomic data within the Max Planck Institute for Molecular Genetics.
-
C.
Department 6: Computational Biology
Department 6: Computational Biology is a research division of the Max Planck Institute for Informatics focused on developing computational methods to study biological systems and data.
-
D.
Computational Biology Department, Carnegie Mellon University
The Computational Biology Department at Carnegie Mellon University is an academic unit specializing in research and education at the intersection of computer science, biology, and related quantitative disciplines.
-
E.
Institute of Systems Biology
The Institute of Systems Biology is a research center at Universiti Kebangsaan Malaysia focused on integrative, interdisciplinary studies of biological systems using computational and experimental approaches.
- F. None of above. chosen
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69d8dd084ff48190ac0f8c46ee722629 |
completed | April 10, 2026, 11:20 a.m. |
| NER | Named-entity recognition | batch_69e5e97cfaa08190b7085d28fe970108 |
completed | April 20, 2026, 8:53 a.m. |
| NED1 | Entity disambiguation (via context triple) | batch_6a06f25476488190aa7dd874a54ecb91 |
completed | May 15, 2026, 10:15 a.m. |
| NEDg | Description generation | batch_6a06f41269748190b6fa6301d8eb4f4f |
completed | May 15, 2026, 10:23 a.m. |
| NED2 | Entity disambiguation (via description) | batch_6a06f4da6b04819084dab89e9b3c5d3e |
completed | May 15, 2026, 10:26 a.m. |
Created at: April 10, 2026, 12:06 p.m.